broad specificity oxidative DNA demethylase activity

ID: GO_0035516

Class

Catalysis of the reaction: a methylated nucleobase within DNA + 2-oxoglutarate + O2 = a nucleobase within DNA + formaldehyde + succinate + CO2. Catalyzes oxidative demethylation of the DNA base lesions N1- methyladenine, N3-methylcytosine, N1-methylguanine, and N3- methylthymine. Can also act of RNA.

This reaction directly reverses the alkylation on a nucleotide within DNA. Do not confuse with 5-methylcytosine dioxygenase activity ; GO:0070579, which removes the methyl group from position 5 of cytosine in DNA via oxidation of the 5-methylcytosine, followed by removal of the oxidated base by the base excision repair system.

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Classification

Alternative Names

SynonymScopeReference
5fC dioxygenasenarrow synonym
5-formylcytosine dioxygenase activitynarrow synonym
5hmC dioxygenasenarrow synonym
N3-methylcytosine demethylase activitynarrow synonym
5-hydroxymethylcytosine dioxygenase activitynarrow synonym
N1-methyladenine demethylase activitynarrow synonym
1-ethyladenine demethylase activitynarrow synonym
oxidative DNA demethylase activitybroad synonym
2-oxoglutarate-dependent DNA demethylaseexact synonym17991826

References