adult superior intermediate protocerebrum neuron 025 [FBbt_20002329]

Adult neuron belonging to group 025 of the terra incognita neurons with substantial synapsing in the superior intermediate protocerebrum (Scheffer et al., 2020). Uncharacterized putative cell type (based on clustering analysis) from Janelia hemibrain data (Scheffer et al., 2020).

Open adult superior intermediate protocerebrum neuron 025 in VFB

Example Images

adult superior intermediate protocerebrum neuron 025 adult superior intermediate protocerebrum neuron 025

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_20002329",
            "symbol": "SIP025",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_20002329",
            "label": "adult superior intermediate protocerebrum neuron 025"
        },
        "description": [
            "Adult neuron belonging to group 025 of the terra incognita neurons with substantial synapsing in the superior intermediate protocerebrum (Scheffer et al., 2020)."
        ],
        "comment": [
            "Uncharacterized putative cell type (based on clustering analysis) from Janelia hemibrain data (Scheffer et al., 2020)."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00047095",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00047095",
            "label": "adult neuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00045032",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain"
                ],
                "short_form": "FBbt_00045032",
                "label": "superior intermediate protocerebrum"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchk55y",
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                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchk55y",
                "label": "SIP025_R (FlyEM-HB:706080993)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
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                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
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                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
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                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/k55y/VFB_00101567/"
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                "channel": {
                    "symbol": "",
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                    "label": "SIP025_R - 706080993_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
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                    "types": [
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                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchk55y",
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                "short_form": "VFB_jrchk55y",
                "label": "SIP025_R (FlyEM-HB:706080993)"
            },
            "channel_image": {
                "image": {
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                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101384",
                        "label": "JRC_FlyEM_Hemibrain_c"
                    },
                    "index": [],
                    "template_anatomy": {
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                        "iri": "http://virtualflybrain.org/reports/VFB_00101384",
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                            "Individual",
                            "Nervous_system",
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                            "has_image"
                        ],
                        "short_form": "VFB_00101384",
                        "label": "JRC_FlyEM_Hemibrain"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/k55y/VFB_00101384/"
                },
                "channel": {
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                    ],
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                },
                "imaging_technique": {
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                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
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                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        }
    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "SIP025",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0246888",
                    "types": [
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                    ],
                    "short_form": "FBrf0246888",
                    "label": "Scheffer et al., 2020, eLife 9: e57443"
                },
                "FlyBase": "",
                "PubMed": "32880371",
                "DOI": "10.7554/eLife.57443"
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "adult SIP025 neuron",
                "type": ""
            },
            "pub": {
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                    ],
                    "short_form": "FBrf0246888",
                    "label": "Scheffer et al., 2020, eLife 9: e57443"
                },
                "FlyBase": "",
                "PubMed": "32880371",
                "DOI": "10.7554/eLife.57443"
            }
        }
    ],
    "def_pubs": [
        {
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                "symbol": "",
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                ],
                "short_form": "FBrf0246888",
                "label": "Scheffer et al., 2020, eLife 9: e57443"
            },
            "FlyBase": "",
            "PubMed": "32880371",
            "DOI": "10.7554/eLife.57443"
        }
    ]
}