adult superior intermediate protocerebrum neuron 057 [FBbt_20002361]

Adult neuron belonging to group 057 of the terra incognita neurons with substantial synapsing in the superior intermediate protocerebrum (Scheffer et al., 2020). Uncharacterized putative cell type (based on clustering analysis) from Janelia hemibrain data (Scheffer et al., 2020).

Open adult superior intermediate protocerebrum neuron 057 in VFB

Example Images

adult superior intermediate protocerebrum neuron 057 adult superior intermediate protocerebrum neuron 057

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_20002361",
            "symbol": "SIP057",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_20002361",
            "label": "adult superior intermediate protocerebrum neuron 057"
        },
        "description": [
            "Adult neuron belonging to group 057 of the terra incognita neurons with substantial synapsing in the superior intermediate protocerebrum (Scheffer et al., 2020)."
        ],
        "comment": [
            "Uncharacterized putative cell type (based on clustering analysis) from Janelia hemibrain data (Scheffer et al., 2020)."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00047095",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00047095",
            "label": "adult neuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00045032",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain"
                ],
                "short_form": "FBbt_00045032",
                "label": "superior intermediate protocerebrum"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchk581",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchk581",
                "label": "SIP057_R (FlyEM-HB:5812980745)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/k581/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchk581",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchk581",
                    "label": "SIP057_R - 5812980745_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchk581",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchk581",
                "label": "SIP057_R (FlyEM-HB:5812980745)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101384",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101384",
                        "label": "JRC_FlyEM_Hemibrain_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101384",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101384",
                        "label": "JRC_FlyEM_Hemibrain"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/k581/VFB_00101384/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchk581",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchk581",
                    "label": "SIP057_R - 5812980745_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        }
    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "adult SIP057 neuron",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0246888",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0246888",
                    "label": "Scheffer et al., 2020, eLife 9: e57443"
                },
                "FlyBase": "",
                "PubMed": "32880371",
                "DOI": "10.7554/eLife.57443"
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "SIP057",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0246888",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0246888",
                    "label": "Scheffer et al., 2020, eLife 9: e57443"
                },
                "FlyBase": "",
                "PubMed": "32880371",
                "DOI": "10.7554/eLife.57443"
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0246888",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0246888",
                "label": "Scheffer et al., 2020, eLife 9: e57443"
            },
            "FlyBase": "",
            "PubMed": "32880371",
            "DOI": "10.7554/eLife.57443"
        }
    ]
}