larval A01n neuron [FBbt_00111245]

Larval neuron that is early-born in the NB1-2 Notch OFF primary hemilineage (Mark et al., 2021). Its primary neurite extends anterior and posteriorly close to or crossing the midline, for most of the length of the ventral nerve cord. The dendritic terminals are located more anteriorly and the axonal terminals more posteriorly. It receives input from the Basin-2 neuron. Renamed from A12q to A01n in Mark et al. (2021) supplement (based on catmaid skid), probably due to updated lineage assignment.

Open larval A01n neuron in VFB

Example Images

larval A01n neuron larval A01n neuron

VFB Term Json

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            ],
            "short_form": "FBbt_00111245",
            "label": "larval A01n neuron"
        },
        "description": [
            "Larval neuron that is early-born in the NB1-2 Notch OFF primary hemilineage (Mark et al., 2021). Its primary neurite extends anterior and posteriorly close to or crossing the midline, for most of the length of the ventral nerve cord. The dendritic terminals are located more anteriorly and the axonal terminals more posteriorly. It receives input from the Basin-2 neuron."
        ],
        "comment": [
            "Renamed from A12q to A01n in Mark et al. (2021) supplement (based on catmaid skid), probably due to updated lineage assignment."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00001461",
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            ],
            "short_form": "FBbt_00001461",
            "label": "1-2I"
        },
        {
            "symbol": "",
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            "types": [
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                "Anatomy",
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                "Class",
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            ],
            "short_form": "FBbt_00051309",
            "label": "NB1-2 Notch OFF hemilineage primary neuron"
        }
    ],
    "relationships": [
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            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013008",
                "label": "receives synaptic input from neuron",
                "type": "receives_synaptic_input_from_neuron"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111229",
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                ],
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                "label": "larval Basin-2 neuron"
            }
        },
        {
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                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
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                "symbol": "",
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            }
        },
        {
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                "label": "has soma location",
                "type": "has_soma_location"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111225",
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                ],
                "short_form": "FBbt_00111225",
                "label": "cell body rind of larval ventral nerve cord"
            }
        }
    ],
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                    "label": "L1 CNS neuron A12q_a1l_c"
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    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_narrow_synonym",
                "label": "larval A12q neuron",
                "type": ""
            },
            "pub": {
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                    "symbol": "",
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                    "short_form": "FBrf0228257",
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                },
                "FlyBase": "FBrf0228257",
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                "DOI": "10.1038/nature14297"
            }
        }
    ],
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}