larval A02k neuron [FBbt_00048655]

Larval interneuron (Zwart et al., 2016) that is early-born in the NB2-1 Notch OFF primary hemilineage (Mark et al., 2021). Its soma is found ventrally and its neurite extends dorsally, close to the midline, before extending laterally, then back ventrally (Zwart et al., 2016). Listed as PMSI in Mark et al. (2021) supplement, but lacks characteristic dorsal loop (Zwart et al., 2016) and not included in PMSI group by Kohsaka et al. (2019) - FBrf0242656.
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Open larval A02k neuron in VFB

Example Images

larval A02k neuron

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_00048655",
            "symbol": "",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Larva",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00048655",
            "label": "larval A02k neuron"
        },
        "description": [
            "Larval interneuron (Zwart et al., 2016) that is early-born in the NB2-1 Notch OFF primary hemilineage (Mark et al., 2021). Its soma is found ventrally and its neurite extends dorsally, close to the midline, before extending laterally, then back ventrally (Zwart et al., 2016)."
        ],
        "comment": [
            "Listed as PMSI in Mark et al. (2021) supplement, but lacks characteristic dorsal loop (Zwart et al., 2016) and not included in PMSI group by Kohsaka et al. (2019) - FBrf0242656."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00001466",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Larva",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00001466",
            "label": "2-1I"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00051318",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00051318",
            "label": "NB2-1 Notch OFF hemilineage primary neuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00001102",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Class",
                    "Ganglion",
                    "Larva",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00001102",
                "label": "larval ventral nerve cord"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002100",
                "label": "has soma location",
                "type": "has_soma_location"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111225",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Class",
                    "Larva",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00111225",
                "label": "cell body rind of larval ventral nerve cord"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00101534",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_00101534",
                "label": "A02k Pseudolooper-1_a1l  (L1EM:4715415)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/1534/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00101534",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00101534",
                    "label": "L1 CNS neuron A02k Pseudolooper-1_a1l _c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        }
    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_narrow_synonym",
                "label": "pseudolooper-1",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0233076",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0233076",
                    "label": "Zwart et al., 2016, Neuron 91(3): 615--628"
                },
                "FlyBase": "FBrf0233076",
                "PubMed": "27427461",
                "DOI": "10.1016/j.neuron.2016.06.031"
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0249021",
                "types": [
                    "Entity",
                    "Individual",
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                ],
                "short_form": "FBrf0249021",
                "label": "Mark et al., 2021, eLife 10: e67510"
            },
            "FlyBase": "",
            "PubMed": "33973523",
            "DOI": "10.7554/eLife.67510"
        }
    ]
}