larval Jaam3 neuron [FBbt_00111658]

Interneuron of the larval ventral nerve cord (Heckscher et al., 2015) that is late-born in the NB5-2 Notch OFF primary hemilineage (Mark et al., 2021). The primary neurite extends into the neuropil forming one arbor that extends anteriorly (Heckscher et al., 2015). One neurite crosses the midline and forms a broad arbor that extends anteriolaterally and overlaps with the dendrites of the A08e1 local neuron, to which it outputs (Heckscher et al., 2015). It also forms substantial synapses to Jaam1 (Heckscher et al., 2015). It receives strong input from dorsal proprioceptive multidendritic neurons and the dorsal bipolar neuron (dbp) (Heckscher et al., 2015). There is one of these neuron per hemineuromere (Heckscher et al., 2015). These neurons were identified in two EM reconstructions: one of the full CNS of a 6h old first instar larva, and another of abdominal segment 3 of a 12-24h old first instar larva. Only bilateral connections are reported. The number of identified input synapses in A1 was the following (number in brackets left/right): from dbp (9/11), from ddaD/ddaE/dda1 (35/40). The number of identified output synapses was the following (number in brackets left/right): to Jaam1 (19/18), to A08e1 (12/18). It is still not known if the pattern of connections is the same in the other abdominal segments (Heckscher et al., 2015). HMD3 and A12c3 synonyms from catmaid.

Open larval Jaam3 neuron in VFB

Example Images

larval Jaam3 neuron larval Jaam3 neuron

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_00111658",
            "symbol": "",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Larva",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00111658",
            "label": "larval Jaam3 neuron"
        },
        "description": [
            "Interneuron of the larval ventral nerve cord (Heckscher et al., 2015) that is late-born in the NB5-2 Notch OFF primary hemilineage (Mark et al., 2021). The primary neurite extends into the neuropil forming one arbor that extends anteriorly (Heckscher et al., 2015). One neurite crosses the midline and forms a broad arbor that extends anteriolaterally and overlaps with the dendrites of the A08e1 local neuron, to which it outputs (Heckscher et al., 2015). It also forms substantial synapses to Jaam1 (Heckscher et al., 2015). It receives strong input from dorsal proprioceptive multidendritic neurons and the dorsal bipolar neuron (dbp) (Heckscher et al., 2015). There is one of these neuron per hemineuromere (Heckscher et al., 2015)."
        ],
        "comment": [
            "These neurons were identified in two EM reconstructions: one of the full CNS of a 6h old first instar larva, and another of abdominal segment 3 of a 12-24h old first instar larva. Only bilateral connections are reported. The number of identified input synapses in A1 was the following (number in brackets left/right): from dbp (9/11), from ddaD/ddaE/dda1 (35/40). The number of identified output synapses was the following (number in brackets left/right): to Jaam1 (19/18), to A08e1 (12/18). It is still not known if the pattern of connections is the same in the other abdominal segments (Heckscher et al., 2015). HMD3 and A12c3 synonyms from catmaid."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00051311",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00051311",
            "label": "NB5-2 Notch OFF hemilineage primary neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00001496",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Larva",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00001496",
            "label": "5-2I"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013009",
                "label": "sends_synaptic_output_to_cell",
                "type": "sends_synaptic_output_to_cell"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111653",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Class",
                    "Larva",
                    "Nervous_system",
                    "Neuron"
                ],
                "short_form": "FBbt_00111653",
                "label": "larval A08e1 local neuron"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013009",
                "label": "sends_synaptic_output_to_cell",
                "type": "sends_synaptic_output_to_cell"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111656",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Class",
                    "Larva",
                    "Nervous_system",
                    "Neuron"
                ],
                "short_form": "FBbt_00111656",
                "label": "larval Jaam1 neuron"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013008",
                "label": "receives synaptic input from neuron",
                "type": "receives_synaptic_input_from_neuron"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00002442",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Class",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "Sensory_neuron"
                ],
                "short_form": "FBbt_00002442",
                "label": "abdominal dorsal bipolar neuron dbp"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00001102",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Class",
                    "Ganglion",
                    "Larva",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00001102",
                "label": "larval ventral nerve cord"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002100",
                "label": "has soma location",
                "type": "has_soma_location"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111225",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Class",
                    "Larva",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00111225",
                "label": "cell body rind of larval ventral nerve cord"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002215",
                "label": "capable of",
                "type": "capable_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/GO_0040012",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "GO_0040012",
                "label": "regulation of locomotion"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0000053",
                "label": "bearer of",
                "type": "bearer_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/PATO_0000618",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "PATO_0000618",
                "label": "bilateral"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00101032",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_00101032",
                "label": "Jaam-3_a1r (HMD3 (A12 c3)) (L1EM:13775274)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/1032/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00101032",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00101032",
                    "label": "L1 CNS neuron Jaam-3_a1r (HMD3 (A12 c3))_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00101026",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_00101026",
                "label": "Jaam-3_a1l (HMD3 (A12 c3)) (L1EM:11928389)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/1026/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00101026",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00101026",
                    "label": "L1 CNS neuron Jaam-3_a1l (HMD3 (A12 c3))_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        }
    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_narrow_synonym",
                "label": "A12c3",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "A06j",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0249021",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0249021",
                    "label": "Mark et al., 2021, eLife 10: e67510"
                },
                "FlyBase": "",
                "PubMed": "33973523",
                "DOI": "10.7554/eLife.67510"
            }
        },
        {
            "synonym": {
                "scope": "has_narrow_synonym",
                "label": "HMD3",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0249021",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0249021",
                "label": "Mark et al., 2021, eLife 10: e67510"
            },
            "FlyBase": "",
            "PubMed": "33973523",
            "DOI": "10.7554/eLife.67510"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0229965",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0229965",
                "label": "Heckscher et al., 2015, Neuron 88(2): 314--329"
            },
            "FlyBase": "FBrf0229965",
            "PubMed": "26439528",
            "DOI": "10.1016/j.neuron.2015.09.009"
        }
    ]
}