lobula columnar neuron LC13 [FBbt_00100485]

An extrinsic columnar neuron whose cell body lies in the ventral area of the lateral cell body rind. It has a complex multilayer pattern, with denser arbors in lobula layers 3 and 5B, and other arbors in layers 2, 4, 5A and 6. Presynaptic sites are observed in layers 3 and 4. It projects to a large, very posterior optic glomerulus of the PVLP, ventral to LC11. There are around 108 cells of this type. Pre- versus postsynaptic innervation assessed with a presynaptic marker (synaptotagmin-HA driver) (Wu et al., 2016).

Open lobula columnar neuron LC13 in VFB

Example Images

lobula columnar neuron LC13 lobula columnar neuron LC13 lobula columnar neuron LC13 lobula columnar neuron LC13 lobula columnar neuron LC13

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_00100485",
            "symbol": "LC13",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00100485",
            "label": "lobula columnar neuron LC13"
        },
        "description": [
            "An extrinsic columnar neuron whose cell body lies in the ventral area of the lateral cell body rind. It has a complex multilayer pattern, with denser arbors in lobula layers 3 and 5B, and other arbors in layers 2, 4, 5A and 6. Presynaptic sites are observed in layers 3 and 4. It projects to a large, very posterior optic glomerulus of the PVLP, ventral to LC11. There are around 108 cells of this type."
        ],
        "comment": [
            "Pre- versus postsynaptic innervation assessed with a presynaptic marker (synaptotagmin-HA driver) (Wu et al., 2016)."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "LC",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00003870",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00003870",
            "label": "lobula columnar neuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002100",
                "label": "has soma location",
                "type": "has_soma_location"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00100201",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00100201",
                "label": "adult lateral brain cell body rind"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003855",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003855",
                "label": "lobula layer 3"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003856",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003856",
                "label": "lobula layer 4"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013001",
                "label": "has_synaptic_IO_in",
                "type": "has_synaptic_IO_in"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111744",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00111744",
                "label": "lobula layer 5B"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00040017",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00040017",
                "label": "lobula layer 6"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111743",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00111743",
                "label": "lobula layer 5A"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003854",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003854",
                "label": "lobula layer 2"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends_synaptic_output_to_region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00007582",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00007582",
                "label": "optic glomerulus of the PVLP"
            }
        }
    ],
    "xrefs": [
        {
            "link_base": "https://flybrain-ndb.virtualflybrain.org/neuronrec-",
            "site": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/FlyBrain_NDB",
                "types": [
                    "Entity",
                    "Individual",
                    "Site"
                ],
                "short_form": "FlyBrain_NDB",
                "label": "FlyBrain NeuronDB"
            },
            "is_data_source": false,
            "link_postfix": [
                ".html"
            ],
            "icon": "http://flybrain-ndb.virtualflybrain.org/NDB_title260.gif",
            "accession": "10012",
            "link_text": "lobula columnar neuron LC13 on FlyBrain NeuronDB",
            "homepage": "https://flybrain-ndb.virtualflybrain.org"
        }
    ],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjxgc",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjxgc",
                "label": "LC13(LWF2)_R (FlyEM-HB:1842682500)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101384",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101384",
                        "label": "JRC_FlyEM_Hemibrain_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101384",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101384",
                        "label": "JRC_FlyEM_Hemibrain"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jxgc/VFB_00101384/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjxgc",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjxgc",
                    "label": "LC13(LWF2)_R - 1842682500_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjxgc",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjxgc",
                "label": "LC13(LWF2)_R (FlyEM-HB:1842682500)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jxgc/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjxgc",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjxgc",
                    "label": "LC13(LWF2)_R - 1842682500_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjxfl",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjxfl",
                "label": "LC13(LWF2)_R (FlyEM-HB:1374784418)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jxfl/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjxfl",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjxfl",
                    "label": "LC13(LWF2)_R - 1374784418_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjxfl",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjxfl",
                "label": "LC13(LWF2)_R (FlyEM-HB:1374784418)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101384",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101384",
                        "label": "JRC_FlyEM_Hemibrain_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101384",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101384",
                        "label": "JRC_FlyEM_Hemibrain"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jxfl/VFB_00101384/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjxfl",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjxfl",
                    "label": "LC13(LWF2)_R - 1374784418_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjxge",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjxge",
                "label": "LC13(LWF2)_R (FlyEM-HB:2027880999)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101384",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101384",
                        "label": "JRC_FlyEM_Hemibrain_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101384",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101384",
                        "label": "JRC_FlyEM_Hemibrain"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jxge/VFB_00101384/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjxge",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjxge",
                    "label": "LC13(LWF2)_R - 2027880999_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        }
    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "Lcn13",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "LC13",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0246888",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0246888",
                    "label": "Scheffer et al., 2020, eLife 9: e57443"
                },
                "FlyBase": "",
                "PubMed": "32880371",
                "DOI": "10.7554/eLife.57443"
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0193607",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0193607",
                "label": "Otsuna and Ito, 2006, J. Comp. Neurol. 497(6): 928--958"
            },
            "FlyBase": "",
            "PubMed": "16802334",
            "DOI": "10.1002/cne.21015"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0234700",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0234700",
                "label": "Wu et al., 2016, eLife 5: e21022"
            },
            "FlyBase": "FBrf0234700",
            "PubMed": "28029094",
            "DOI": "10.7554/eLife.21022"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0233032",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0233032",
                "label": "Panser et al., 2016, Curr. Biol. 26(15): 1943--1954"
            },
            "FlyBase": "",
            "PubMed": "27426516",
            "DOI": "10.1016/j.cub.2016.05.052"
        }
    ]
}