transmedullary neuron Tm7 [FBbt_00003795]

Transmedullary wide-field neuron that terminates in lobula layer 5 with both fine and bleb-type arborizations. It has fine arborizations in medulla layers M3, M4, M6 and M8, and bleb-type arborizations in layer M6 (Fischbach and Dittrich, 1989; Morante and Desplan, 2008). It is a cholinergic neuron (Varija Raghu et al., 2011). The neurotransmitter was assessed by co-labelling cells with a Cha-GAL4.7.4 driver [FBtp0014830] and an anti-ChAT antibody (Varija Raghu et al., 2011). The identification of axons was done using a UAS-tau (P{UAS-tau-lacZ.O}) [FBtp0010033] reporter (Morante and Desplan, 2008). The morphology of terminals was judged from figures in Fischbach and Dittrich (1989) as assessed by FlyBrain Neuron DB.

Open transmedullary neuron Tm7 in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_00003795",
            "symbol": "Tm7",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Cholinergic",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00003795",
            "label": "transmedullary neuron Tm7"
        },
        "description": [
            "Transmedullary wide-field neuron that terminates in lobula layer 5 with both fine and bleb-type arborizations. It has fine arborizations in medulla layers M3, M4, M6 and M8, and bleb-type arborizations in layer M6 (Fischbach and Dittrich, 1989; Morante and Desplan, 2008). It is a cholinergic neuron (Varija Raghu et al., 2011)."
        ],
        "comment": [
            "The neurotransmitter was assessed by co-labelling cells with a Cha-GAL4.7.4 driver [FBtp0014830] and an anti-ChAT antibody (Varija Raghu et al., 2011). The identification of axons was done using a UAS-tau (P{UAS-tau-lacZ.O}) [FBtp0010033] reporter (Morante and Desplan, 2008). The morphology of terminals was judged from figures in Fischbach and Dittrich (1989) as assessed by FlyBrain Neuron DB."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00013788",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00013788",
            "label": "wide field transmedullary neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00058205",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Cholinergic",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00058205",
            "label": "adult cholinergic neuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends_synaptic_output_to_region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003755",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003755",
                "label": "medulla layer M6"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends_synaptic_output_to_region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00040016",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00040016",
                "label": "lobula layer 5"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003755",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003755",
                "label": "medulla layer M6"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003758",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003758",
                "label": "medulla layer M8"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00040016",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00040016",
                "label": "lobula layer 5"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003753",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003753",
                "label": "medulla layer M4"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003752",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00003752",
                "label": "medulla layer M3"
            }
        }
    ],
    "xrefs": [
        {
            "link_base": "https://flybrain-ndb.virtualflybrain.org/neuronrec-",
            "site": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/FlyBrain_NDB",
                "types": [
                    "Entity",
                    "Individual",
                    "Site"
                ],
                "short_form": "FlyBrain_NDB",
                "label": "FlyBrain NeuronDB"
            },
            "is_data_source": false,
            "link_postfix": [
                ".html"
            ],
            "icon": "http://flybrain-ndb.virtualflybrain.org/NDB_title260.gif",
            "accession": "10161",
            "link_text": "transmedullary neuron Tm7 on FlyBrain NeuronDB",
            "homepage": "https://flybrain-ndb.virtualflybrain.org"
        }
    ],
    "anatomy_channel_image": [],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "Tm7",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0204652",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0204652",
                "label": "Morante and Desplan, 2008, Curr. Biol. 18(8): 553--565"
            },
            "FlyBase": "",
            "PubMed": "18403201",
            "DOI": "10.1016/j.cub.2008.02.075"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0049410",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0049410",
                "label": "Fischbach and Dittrich, 1989, Cell Tissue Res. 258(3): 441--475"
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0212356",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0212356",
                "label": "Varija Raghu et al., 2011, J. Comp. Neurol. 519(1): 162--176"
            },
            "FlyBase": "",
            "PubMed": "21120933",
            "DOI": "10.1002/cne.22512"
        }
    ]
}